Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain CHNf1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1053789 bp
Thymine Count
1042475 bp
Guanine Count
934263 bp
Cytosine Count
953469 bp
Genome Length
3984061 bp
Protein-coding Genes
3529 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | D2B32_00900 | Not Available | Positive | 221646 - 222374 | 26810.2 |
| elongation factor ts | D2B32_00905 | Not Available | Positive | 222506 - 223348 | 29849.0 |
| ump kinase | D2B32_00910 | Not Available | Positive | 223536 - 224267 | 26197.9 |
| ribosome-recycling factor | D2B32_00915 | Not Available | Positive | 224321 - 224878 | 20639.0 |
| di-trans,poly-cis-decaprenylcistransferase | D2B32_00920 | Not Available | Positive | 224952 - 225722 | 29019.2 |
| cdp-diglyceride synthetase | D2B32_00925 | Not Available | Positive | 225740 - 226582 | 30952.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | D2B32_00930 | Not Available | Positive | 226631 - 227839 | 43687.1 |
| zinc metalloprotease | D2B32_00935 | Not Available | Positive | 227836 - 229194 | 48952.7 |
| outer membrane protein assembly factor bama | D2B32_00940 | Not Available | Positive | 229243 - 231654 | 89892.2 |
| chaperone protein skp | D2B32_00945 | Not Available | Positive | 231669 - 232178 | 18953.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






