Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain CHNf1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1053789 bp
Thymine Count
1042475 bp
Guanine Count
934263 bp
Cytosine Count
953469 bp
Genome Length
3984061 bp
Protein-coding Genes
3529 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter substrate binding subunit | D2B32_10450 | Not Available | Negative | 2329100 - 2330092 | 36309.9 |
| ubix family flavin prenyltransferase | D2B32_10455 | Not Available | Negative | 2330354 - 2330989 | 22704.6 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | D2B32_10460 | Not Available | Negative | 2330996 - 2332351 | 49450.3 |
| hypothetical protein | D2B32_10465 | Not Available | Positive | 2332340 - 2332603 | 9678.81 |
| class 1 fructose-bisphosphatase | D2B32_10470 | Not Available | Positive | 2332657 - 2333667 | 37343.4 |
| inorganic pyrophosphatase | D2B32_10475 | Not Available | Positive | 2333837 - 2334367 | 19601.3 |
| gamma-glutamylcyclotransferase | D2B32_10480 | Not Available | Negative | 2334427 - 2334774 | 13387.6 |
| translocation/assembly module tamb | D2B32_10485 | Not Available | Negative | 2334785 - 2338549 | 136449.0 |
| outer membrane protein assembly factor | D2B32_10490 | Not Available | Negative | 2338546 - 2340294 | 65648.1 |
| peptide-methionine (s)-s-oxide reductase msra | D2B32_10495 | Not Available | Positive | 2340440 - 2341078 | 23345.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






