Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain CHNf1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1053789 bp
Thymine Count
1042475 bp
Guanine Count
934263 bp
Cytosine Count
953469 bp
Genome Length
3984061 bp
Protein-coding Genes
3529 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2B32_05945 | Not Available | Negative | 1327295 - 1328902 | 59211.6 |
| duf4123 domain-containing protein | D2B32_05950 | Not Available | Negative | 1328892 - 1329680 | 30834.1 |
| type vi secretion system tip protein vgrg | D2B32_05955 | Not Available | Negative | 1329680 - 1331656 | 72467.0 |
| hcp family type vi secretion system effector | D2B32_05960 | Not Available | Negative | 1331783 - 1332301 | 19086.4 |
| wyl domain-containing protein | D2B32_05965 | Not Available | Positive | 1332717 - 1333511 | 30875.6 |
| type i-f crispr-associated endonuclease cas1 | D2B32_05970 | Not Available | Positive | 1333626 - 1334615 | 37530.8 |
| crispr-associated endonuclease cas3'' | D2B32_05975 | Not Available | Positive | 1334612 - 1337548 | 110627.0 |
| hypothetical protein | D2B32_05980 | Not Available | Positive | 1337552 - 1338499 | 35620.2 |
| hypothetical protein | D2B32_05985 | Not Available | Positive | 1338508 - 1339518 | 38070.0 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | D2B32_05990 | Not Available | Positive | 1339527 - 1340078 | 20778.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






