Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | strain CHNf1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1053789 bp
Thymine Count
1042475 bp
Guanine Count
934263 bp
Cytosine Count
953469 bp
Genome Length
3984061 bp
Protein-coding Genes
3529 genes
Non-Coding Genes
118 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | D2B32_05535 | Not Available | Positive | 1244183 - 1244515 | 11917.8 |
| protein translocase subunit secd | D2B32_05540 | Not Available | Positive | 1244537 - 1246390 | 66796.5 |
| protein translocase subunit secf | D2B32_05545 | Not Available | Positive | 1246405 - 1247352 | 34389.3 |
| inositol monophosphatase | D2B32_05550 | Not Available | Negative | 1247520 - 1248323 | 29089.9 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | D2B32_05555 | Not Available | Positive | 1248502 - 1249236 | 27121.9 |
| hth-type transcriptional regulator iscr | D2B32_05560 | Not Available | Positive | 1249306 - 1249872 | 20391.4 |
| iscs subfamily cysteine desulfurase | D2B32_05565 | Not Available | Positive | 1249899 - 1251113 | 44843.7 |
| fe-s cluster assembly scaffold iscu | D2B32_05570 | Not Available | Positive | 1251150 - 1251533 | 13662.2 |
| iron-sulfur cluster assembly protein isca | D2B32_05575 | Not Available | Positive | 1251594 - 1251917 | 11717.8 |
| co-chaperone hscb | D2B32_05580 | Not Available | Positive | 1251966 - 1252481 | 19618.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |






