Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 family transposase | D2F89_26290 | Not Available | Negative | 5082702 - 5082769 | 2583.1 |
| omptin family outer membrane protease | D2F89_26295 | Not Available | Positive | 5083070 - 5084014 | 34892.3 |
| hypothetical protein | D2F89_26305 | Not Available | Negative | 5084751 - 5086735 | 65748.2 |
| transposase | D2F89_26310 | Not Available | Negative | 5086736 - 5087628 | 34295.4 |
| luxr family transcriptional regulator | D2F89_26330 | Not Available | Positive | 5088825 - 5089457 | 23413.7 |
| lytic transglycosylase domain-containing protein | D2F89_26335 | Not Available | Negative | 5089475 - 5089978 | 19263.8 |
| hypothetical protein | D2F89_26340 | Not Available | Negative | 5090062 - 5090280 | 8077.23 |
| type iii effector | D2F89_26345 | Not Available | Negative | 5092121 - 5092752 | 24320.8 |
| type iii effector protein | D2F89_26350 | Not Available | Positive | 5093053 - 5093861 | 31811.7 |
| hcp family type vi secretion system effector | D2F89_26355 | Not Available | Positive | 5094378 - 5094896 | 19191.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





