Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escr/yscr/hrcr family type iii secretion system export apparatus protein | D2F89_24380 | Not Available | Negative | 4721318 - 4721983 | 24480.4 |
| yscq/hrcq family type iii secretion apparatus protein | D2F89_24385 | Not Available | Negative | 4721973 - 4722920 | 36294.5 |
| effector protein | D2F89_24390 | Not Available | Negative | 4722920 - 4723537 | 24172.6 |
| type iii secretion protein | D2F89_24400 | Not Available | Negative | 4723773 - 4724240 | 18646.7 |
| flii/yscn family atpase | D2F89_24405 | Not Available | Negative | 4724221 - 4725540 | 48535.5 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | D2F89_24410 | Not Available | Negative | 4725545 - 4727605 | 76395.4 |
| yopn family type iii secretion system gatekeeper subunit | D2F89_24415 | Not Available | Negative | 4727598 - 4728743 | 43548.6 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | D2F89_24420 | Not Available | Negative | 4728748 - 4730451 | 62739.4 |
| helix-turn-helix domain-containing protein | D2F89_24425 | Not Available | Negative | 4730448 - 4731197 | 28286.4 |
| insulinase family protein | D2F89_24430 | Not Available | Negative | 4731537 - 4734332 | 104742.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





