Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | D2F89_00780 | Not Available | Positive | 164789 - 165589 | 29649.3 |
| aldehyde dehydrogenase | D2F89_00785 | Not Available | Positive | 165786 - 167225 | 52301.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | D2F89_00790 | Not Available | Negative | 167267 - 168268 | 35750.7 |
| cytochrome b561 | D2F89_00795 | Not Available | Positive | 168457 - 168987 | 20257.6 |
| hypothetical protein | D2F89_00800 | Not Available | Positive | 169232 - 169405 | 5830.16 |
| type i toxin-antitoxin system hok family toxin | D2F89_00805 | Not Available | Negative | 169477 - 169626 | 5645.21 |
| hypothetical protein | D2F89_00810 | Not Available | Positive | 169773 - 169955 | 6782.22 |
| hamp domain-containing protein | D2F89_00815 | Not Available | Positive | 170025 - 171665 | 58885.3 |
| lysr family transcriptional regulator | D2F89_00820 | Not Available | Negative | 171703 - 172626 | 33336.4 |
| voc family protein | D2F89_00825 | Not Available | Positive | 172843 - 174186 | 50987.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





