Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaba permease | D2F89_22895 | Not Available | Negative | 4454960 - 4456360 | 51069.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | D2F89_22900 | Not Available | Negative | 4456598 - 4457878 | 45647.3 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | D2F89_22905 | Not Available | Negative | 4457892 - 4459340 | 51850.1 |
| l-2-hydroxyglutarate oxidase | D2F89_22910 | Not Available | Negative | 4459363 - 4460585 | 44275.4 |
| duf805 domain-containing protein | D2F89_22915 | Not Available | Positive | 4460791 - 4461147 | 13474.7 |
| lysr family transcriptional regulator | D2F89_22925 | Not Available | Negative | 4461198 - 4462094 | 33258.3 |
| pirin-like protein yhak | D2F89_22930 | Not Available | Positive | 4462199 - 4462900 | 25913.0 |
| hypothetical protein | D2F89_22935 | Not Available | Positive | 4462923 - 4463087 | 5949.06 |
| serine dehydratase subunit alpha family protein | D2F89_22940 | Not Available | Negative | 4463220 - 4464530 | 45332.9 |
| transporter | D2F89_22945 | Not Available | Negative | 4464558 - 4465889 | 48317.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





