Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine/thiamine pyrophosphate abc transporter permease thip | D2F89_22585 | Not Available | Positive | 4400167 - 4401777 | 59265.4 |
| thiamine abc transporter atp-binding protein thiq | D2F89_22590 | Not Available | Positive | 4401761 - 4402459 | 25026.6 |
| deda family protein | D2F89_22595 | Not Available | Negative | 4402573 - 4403337 | 28213.8 |
| arabinose operon regulatory protein | D2F89_22600 | Not Available | Negative | 4403423 - 4404301 | 33385.8 |
| ribulokinase | D2F89_22610 | Not Available | Positive | 4404640 - 4406340 | 61150.7 |
| l-arabinose isomerase | D2F89_22615 | Not Available | Positive | 4406351 - 4407853 | 56078.1 |
| l-ribulose-5-phosphate 4-epimerase | D2F89_22620 | Not Available | Positive | 4408022 - 4408717 | 25534.4 |
| dna polymerase ii | D2F89_22625 | Not Available | Positive | 4408792 - 4409203 | 15792.9 |
| duf21 domain-containing protein | D2F89_22630 | Not Available | Negative | 4409204 - 4409695 | 18077.1 |
| inner membrane protein ypjd | D2F89_22635 | Not Available | Negative | 4409762 - 4410553 | 29263.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





