Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2F89_22375 | Not Available | Negative | 4348241 - 4348480 | 9091.3 |
| hypothetical protein | D2F89_22390 | Not Available | Positive | 4350727 - 4351940 | 41547.6 |
| hcp family type vi secretion system effector | D2F89_22395 | Not Available | Negative | 4352133 - 4352612 | 17539.6 |
| hypothetical protein | D2F89_22400 | Not Available | Negative | 4352630 - 4353988 | 51412.1 |
| type vi secretion system membrane subunit tssm | D2F89_22405 | Not Available | Negative | 4353999 - 4357526 | 134487.0 |
| type vi secretion system protein tssa | D2F89_22410 | Not Available | Negative | 4357546 - 4359054 | 56189.8 |
| type vi secretion system-associated protein tago | D2F89_22415 | Not Available | Negative | 4358993 - 4359736 | 26483.8 |
| type vi secretion system atpase tssh | D2F89_22420 | Not Available | Negative | 4359733 - 4362465 | 99372.4 |
| dotu family type iv/vi secretion system protein | D2F89_22425 | Not Available | Negative | 4362475 - 4363248 | 29751.3 |
| type vi secretion system baseplate subunit tssk | D2F89_22430 | Not Available | Negative | 4363253 - 4364599 | 49878.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





