Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 4183404 - 4183480 | Not Available |
| hypothetical protein | D2F89_21390 | Not Available | Positive | 4183494 - 4183724 | 8465.52 |
| dna polymerase iii subunit epsilon | D2F89_21395 | Not Available | Negative | 4183613 - 4184344 | 27114.5 |
| ribonuclease hi | D2F89_21400 | Not Available | Positive | 4184409 - 4184876 | 17597.9 |
| sam-dependent methyltransferase | D2F89_21405 | Not Available | Negative | 4184873 - 4185595 | 27265.7 |
| hydroxyacylglutathione hydrolase | D2F89_21410 | Not Available | Positive | 4185629 - 4186384 | 28435.9 |
| lytic transglycosylase | D2F89_21415 | Not Available | Positive | 4186456 - 4187814 | 49420.3 |
| sam-dependent methyltransferase | D2F89_21420 | Not Available | Negative | 4187862 - 4188632 | 28261.3 |
| endonuclease/exonuclease/phosphatase family protein | D2F89_21425 | Not Available | Negative | 4188710 - 4189510 | 29993.4 |
| lysr family transcriptional regulator | D2F89_21430 | Not Available | Positive | 4189751 - 4190665 | 33767.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





