Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2F89_20900 | Not Available | Positive | 4096429 - 4096632 | 7646.15 |
| trna/rrna methyltransferase | D2F89_20905 | Not Available | Positive | 4096622 - 4097659 | 37800.5 |
| uracil-dna glycosylase | D2F89_20910 | Not Available | Negative | 4097707 - 4098396 | 25663.6 |
| autonomous glycyl radical cofactor grca | D2F89_20915 | Not Available | Positive | 4098701 - 4099084 | 14299.0 |
| cysteine/o-acetylserine transporter | D2F89_20920 | Not Available | Negative | 4099140 - 4099727 | 21323.6 |
| lysr family transcriptional regulator | D2F89_20925 | Not Available | Positive | 4099830 - 4100711 | 33355.3 |
| atp-dependent rna helicase srmb | D2F89_20930 | Not Available | Negative | 4100744 - 4102078 | 49901.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | D2F89_20935 | Not Available | Positive | 4102210 - 4102947 | 27345.5 |
| l-aspartate oxidase | D2F89_20940 | Not Available | Negative | 4102932 - 4104554 | 60279.9 |
| ecf rna polymerase sigma-e factor | D2F89_20945 | Not Available | Positive | 4104962 - 4105537 | 21697.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





