Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | D2F89_20740 | Not Available | Negative | 4062046 - 4062816 | 28376.6 |
| hypothetical protein | D2F89_20745 | Not Available | Positive | 4063003 - 4063224 | 8749.6 |
| glutamate decarboxylase beta | D2F89_20750 | Not Available | Positive | 4063235 - 4064635 | 52671.0 |
| glutamate:gamma-aminobutyrate antiporter | D2F89_20755 | Not Available | Positive | 4064791 - 4066326 | 55080.0 |
| glycoside hydrolase family 10 protein | D2F89_20760 | Not Available | Positive | 4066457 - 4067776 | 49547.8 |
| diguanylate cyclase | D2F89_20765 | Not Available | Positive | 4068153 - 4069535 | 53180.7 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | D2F89_20770 | Not Available | Positive | 4069536 - 4071959 | 91186.7 |
| d-alanyl-d-alanine dipeptidase | D2F89_20775 | Not Available | Positive | 4072217 - 4072798 | 21228.2 |
| abc transporter substrate-binding protein | D2F89_20780 | Not Available | Positive | 4072812 - 4074362 | 57630.2 |
| abc transporter permease | D2F89_20785 | Not Available | Positive | 4074364 - 4075386 | 37451.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





