Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | D2F89_20640 | Not Available | Positive | 4049102 - 4049218 | 4364.59 |
| 30s ribosomal protein s13 | D2F89_20645 | Not Available | Positive | 4049365 - 4049721 | 13100.2 |
| 30s ribosomal protein s11 | D2F89_20650 | Not Available | Positive | 4049738 - 4050127 | 13845.7 |
| 30s ribosomal protein s4 | D2F89_20655 | Not Available | Positive | 4050161 - 4050781 | 23470.5 |
| dna-directed rna polymerase subunit alpha | D2F89_20660 | Not Available | Positive | 4050807 - 4051796 | 36513.9 |
| 50s ribosomal protein l17 | D2F89_20665 | Not Available | Positive | 4051837 - 4052220 | 14365.4 |
| duf1992 domain-containing protein | D2F89_20670 | Not Available | Positive | 4052327 - 4052695 | 13973.6 |
| heavy metal-responsive transcriptional regulator | D2F89_20675 | Not Available | Positive | 4052706 - 4053131 | 16194.4 |
| ribosome alternative rescue factor arfa | D2F89_20680 | Not Available | Positive | 4053187 - 4053405 | 8171.86 |
| large conductance mechanosensitive channel protein mscl | D2F89_20685 | Not Available | Negative | 4053402 - 4053812 | 14957.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





