Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2F89_20385 | Not Available | Negative | 4008468 - 4008650 | 7095.68 |
| lysr family transcriptional regulator | D2F89_20390 | Not Available | Negative | 4008689 - 4009570 | 32725.7 |
| glycine zipper 2tm domain-containing protein | D2F89_20395 | Not Available | Positive | 4009736 - 4010254 | 17706.1 |
| hypothetical protein | D2F89_20400 | Not Available | Positive | 4010270 - 4010809 | 20273.5 |
| gmp synthase (glutamine-hydrolyzing) | D2F89_20405 | Not Available | Negative | 4010902 - 4012479 | 58668.5 |
| imp dehydrogenase | D2F89_20410 | Not Available | Negative | 4012548 - 4014014 | 52025.6 |
| exodeoxyribonuclease vii large subunit | D2F89_20415 | Not Available | Positive | 4014176 - 4015546 | 51862.4 |
| hypothetical protein | D2F89_20420 | Not Available | Negative | 4015543 - 4015758 | 7868.56 |
| ribosome biogenesis gtpase der | D2F89_20425 | Not Available | Negative | 4015827 - 4017299 | 55025.1 |
| outer membrane protein assembly factor bamb | D2F89_20430 | Not Available | Negative | 4017417 - 4018595 | 41859.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





