Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D2F89_20285 | Not Available | Positive | 3990473 - 3990871 | 14593.6 |
| cidb/lrgb family autolysis modulator | D2F89_20290 | Not Available | Positive | 3990868 - 3991563 | 24471.1 |
| cytidine deaminase | D2F89_20295 | Not Available | Positive | 3991693 - 3992577 | 31541.6 |
| protein sana | D2F89_20300 | Not Available | Positive | 3992727 - 3993446 | 27288.5 |
| duf2542 family protein | D2F89_20305 | Not Available | Positive | 3993449 - 3993688 | 9192.55 |
| nad(p)-dependent oxidoreductase | D2F89_20310 | Not Available | Positive | 3993882 - 3995120 | 44367.2 |
| dihydropyrimidine dehydrogenase subunit b | D2F89_20315 | Not Available | Positive | 3995114 - 3996349 | 45071.4 |
| galactoside abc transporter permease | D2F89_20320 | Not Available | Negative | 3996709 - 3997719 | 35552.4 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | D2F89_20325 | Not Available | Negative | 3997735 - 3999255 | 56418.8 |
| galactose abc transporter substrate-binding protein | D2F89_20330 | Not Available | Negative | 3999316 - 4000314 | 35714.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





