Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D2F89_20170 | Not Available | Negative | 3970181 - 3972283 | 77279.0 |
| hypothetical protein | D2F89_20175 | Not Available | Positive | 3972198 - 3972377 | 6806.47 |
| tonb-dependent receptor yncd | D2F89_20180 | Not Available | Negative | 3972317 - 3972442 | 4864.26 |
| ynce family protein | D2F89_20185 | Not Available | Positive | 3972525 - 3973586 | 38658.2 |
| l-asparagine permease | D2F89_20190 | Not Available | Negative | 3973699 - 3975198 | 54194.2 |
| glutathione s-transferase family protein | D2F89_20195 | Not Available | Positive | 3975465 - 3976082 | 23351.2 |
| type vi secretion system paar protein | D2F89_20200 | Not Available | Positive | 3976622 - 3976906 | 9587.43 |
| type vi secretion system tip protein vgrg | D2F89_20205 | Not Available | Positive | 3976925 - 3978889 | 73782.6 |
| duf2169 domain-containing protein | D2F89_20210 | Not Available | Positive | 3978905 - 3979846 | 35772.5 |
| duf4150 domain-containing protein | D2F89_20215 | Not Available | Positive | 3979839 - 3980972 | 41231.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





