Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | D2F89_19865 | Not Available | Negative | 3916576 - 3916989 | 16082.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | D2F89_19870 | Not Available | Negative | 3916991 - 3918316 | 50796.7 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | D2F89_19875 | Not Available | Negative | 3918309 - 3920327 | 77360.8 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | D2F89_19880 | Not Available | Negative | 3920336 - 3922759 | 92286.0 |
| hypothetical protein | D2F89_19885 | Not Available | Negative | 3923023 - 3923247 | 8655.81 |
| ggdef domain-containing protein | D2F89_19890 | Not Available | Positive | 3923348 - 3924706 | 51702.5 |
| cyclic diguanylate phosphodiesterase | D2F89_19895 | Not Available | Positive | 3924882 - 3925607 | 26835.9 |
| siroheme synthase | D2F89_19900 | Not Available | Negative | 3925865 - 3927238 | 49954.4 |
| nitrite transporter nirc | D2F89_19905 | Not Available | Negative | 3927257 - 3928063 | 28548.1 |
| nitrite reductase small subunit | D2F89_19910 | Not Available | Negative | 3928189 - 3928515 | 12284.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





