Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia channel | D2F89_19310 | Not Available | Negative | 3809377 - 3810663 | 44517.4 |
| nitrogen regulatory protein p-ii 2 | D2F89_19315 | Not Available | Negative | 3810693 - 3811031 | 12259.9 |
| multidrug resistance-like atp-binding protein mdlb | D2F89_19320 | Not Available | Negative | 3811212 - 3812993 | 65226.5 |
| smda family multidrug abc transporter permease/atp-binding protein | D2F89_19325 | Not Available | Negative | 3812986 - 3814758 | 66034.3 |
| lrp/asnc family transcriptional regulator | D2F89_19330 | Not Available | Negative | 3814788 - 3815246 | 17438.4 |
| hmp-pp phosphatase | D2F89_19335 | Not Available | Negative | 3815399 - 3816217 | 30344.7 |
| sgrr family transcriptional regulator | D2F89_19340 | Not Available | Positive | 3816317 - 3818017 | 64936.2 |
| 7-cyano-7-deazaguanine synthase | D2F89_19345 | Not Available | Positive | 3818082 - 3818777 | 25469.5 |
| ybgc/fadm family acyl-coa thioesterase | D2F89_19350 | Not Available | Negative | 3818829 - 3819227 | 15098.2 |
| hypothetical protein | D2F89_19355 | Not Available | Negative | 3819333 - 3819704 | 12720.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





