Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | D2F89_18235 | Not Available | Positive | 3577642 - 3579249 | 60770.2 |
| dna topoisomerase 4 subunit a | D2F89_18240 | Not Available | Positive | 3579387 - 3581645 | 83836.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | D2F89_18245 | Not Available | Positive | 3581879 - 3582616 | 27424.7 |
| cell division protein ftsp | D2F89_18250 | Not Available | Positive | 3582691 - 3584103 | 51834.1 |
| ygiq family radical sam protein | D2F89_18255 | Not Available | Positive | 3584214 - 3586433 | 83482.5 |
| lipoprotein yqhh | D2F89_18260 | Not Available | Negative | 3586476 - 3586733 | 9531.62 |
| duf3828 domain-containing protein | D2F89_18265 | Not Available | Negative | 3586782 - 3587708 | 35081.1 |
| 2,5-didehydrogluconate reductase dkga | D2F89_18270 | Not Available | Negative | 3587908 - 3588735 | 31093.3 |
| alcohol dehydrogenase | D2F89_18275 | Not Available | Negative | 3588840 - 3590003 | 42099.4 |
| arac family transcriptional regulator | D2F89_18280 | Not Available | Positive | 3590140 - 3591096 | 36029.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





