Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1414 domain-containing protein | D2F89_16345 | Not Available | Negative | 3222211 - 3222438 | 8288.95 |
| nucleoid-associated protein | D2F89_16350 | Not Available | Positive | 3222620 - 3223627 | 37825.6 |
| 50s ribosomal protein l25 | D2F89_16355 | Not Available | Negative | 3223766 - 3224050 | 10694.0 |
| dead/deah box helicase | D2F89_16360 | Not Available | Negative | 3224175 - 3225935 | 66460.9 |
| aldose epimerase | D2F89_16365 | Not Available | Negative | 3225961 - 3226083 | 4388.34 |
| 16s rrna pseudouridine(516) synthase | D2F89_16370 | Not Available | Positive | 3226084 - 3226779 | 25866.8 |
| bcr/cfla family drug resistance efflux transporter | D2F89_16375 | Not Available | Positive | 3226807 - 3227997 | 43355.4 |
| hypothetical protein | D2F89_16385 | Not Available | Positive | 3228330 - 3228674 | 12525.9 |
| microcin c abc transporter atp-binding protein yejf | D2F89_16390 | Not Available | Negative | 3228678 - 3230267 | 58667.7 |
| abc transporter permease | D2F89_16395 | Not Available | Negative | 3230269 - 3231294 | 38094.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





