Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | D2F89_16090 | Not Available | Positive | 3160962 - 3162428 | 53030.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | D2F89_16095 | Not Available | Positive | 3162430 - 3163281 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | D2F89_16100 | Not Available | Positive | 3163291 - 3163671 | 14361.3 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | D2F89_16105 | Not Available | Positive | 3163739 - 3164542 | 29716.5 |
| 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase | D2F89_16110 | Not Available | Positive | 3164553 - 3165341 | 28072.8 |
| 4-hydroxyphenylacetate permease | D2F89_16115 | Not Available | Positive | 3165517 - 3166893 | 50571.6 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | D2F89_16120 | Not Available | Positive | 3166903 - 3167793 | 34332.0 |
| 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component | D2F89_16125 | Not Available | Positive | 3168044 - 3169606 | 58865.9 |
| 4-hydroxyphenylacetate 3-monooxygenase reductase component | D2F89_16130 | Not Available | Positive | 3169624 - 3170136 | 18522.7 |
| hypothetical protein | D2F89_16135 | Not Available | Positive | 3170215 - 3170361 | 5279.29 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





