Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | D2F89_15890 | Not Available | Positive | 3122101 - 3123105 | 35990.2 |
| acetylglutamate kinase | D2F89_15895 | Not Available | Positive | 3123113 - 3123889 | 27175.3 |
| argininosuccinate lyase | D2F89_15900 | Not Available | Positive | 3123950 - 3125323 | 50332.1 |
| dna-binding transcriptional regulator oxyr | D2F89_15905 | Not Available | Positive | 3125590 - 3126507 | 34278.0 |
| si-specific nad(p)(+) transhydrogenase | D2F89_15910 | Not Available | Negative | 3126490 - 3127890 | 51563.4 |
| amidohydrolase | D2F89_15915 | Not Available | Positive | 3128220 - 3129386 | 42207.6 |
| mfs transporter | D2F89_15920 | Not Available | Positive | 3129429 - 3130745 | 47039.4 |
| tetr family transcriptional regulator | D2F89_15925 | Not Available | Positive | 3130852 - 3131499 | 24405.3 |
| yijd family membrane protein | D2F89_15930 | Not Available | Positive | 3131499 - 3131858 | 13024.3 |
| trna (uridine(54)-c5)-methyltransferase trma | D2F89_15935 | Not Available | Negative | 3131898 - 3132998 | 41911.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





