Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component system sensor histidine kinase qsee/glrk | D2F89_15735 | Not Available | Negative | 3083212 - 3084639 | 53280.5 |
| phosphoribosylformylglycinamidine synthase | D2F89_15740 | Not Available | Negative | 3085198 - 3089085 | 141409.0 |
| phosphoribosylglycinamide synthetase | D2F89_15745 | Not Available | Negative | 3089100 - 3089249 | 5644.69 |
| lytic transglycosylase f | D2F89_15750 | Not Available | Positive | 3089343 - 3090899 | 58305.3 |
| trna adenosine(34) deaminase tada | D2F89_15755 | Not Available | Negative | 3090896 - 3091432 | 20045.4 |
| phosphatidylglycerophosphatase c | D2F89_15760 | Not Available | Negative | 3091457 - 3092092 | 24437.8 |
| murr/rpir family transcriptional regulator | D2F89_15765 | Not Available | Positive | 3092301 - 3093149 | 30709.3 |
| 4fe-4s dicluster domain-containing protein | D2F89_15770 | Not Available | Positive | 3093205 - 3093465 | 9791.79 |
| hypothetical protein | D2F89_15780 | Not Available | Positive | 3094410 - 3094703 | 10951.2 |
| yiix family permuted papain-like enzyme | D2F89_15785 | Not Available | Negative | 3094632 - 3095240 | 23184.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





