Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2689 domain-containing protein | D2F89_15165 | Not Available | Positive | 2975040 - 2975393 | 12812.6 |
| conjugal transfer protein trbg | D2F89_15170 | Not Available | Positive | 2975386 - 2975637 | 9195.97 |
| type iv conjugative transfer system protein trav | D2F89_15175 | Not Available | Positive | 2975634 - 2976149 | 18463.2 |
| protein trar | D2F89_15180 | Not Available | Positive | 2976283 - 2976504 | 8313.95 |
| type iv secretion system protein trac | D2F89_15185 | Not Available | Positive | 2976664 - 2979291 | 99274.5 |
| type-f conjugative transfer system protein trbi | D2F89_15190 | Not Available | Positive | 2979288 - 2979674 | 14222.0 |
| type-f conjugative transfer system protein traw | D2F89_15195 | Not Available | Positive | 2979557 - 2980303 | 27275.8 |
| conjugal transfer protein trau | D2F89_15200 | Not Available | Positive | 2980300 - 2981292 | 36667.4 |
| atp-binding protein | D2F89_15205 | Not Available | Positive | 2981318 - 2981779 | 17864.3 |
| hypothetical protein | D2F89_15210 | Not Available | Positive | 2981809 - 2982261 | 17167.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





