Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | D2F89_14610 | Not Available | Positive | 2863107 - 2863370 | 10042.5 |
| purine-nucleoside phosphorylase | D2F89_14615 | Not Available | Negative | 2863531 - 2864250 | 25951.4 |
| phosphopentomutase | D2F89_14620 | Not Available | Negative | 2864307 - 2865530 | 44372.4 |
| thymidine phosphorylase | D2F89_14625 | Not Available | Negative | 2865582 - 2866904 | 47182.9 |
| 2-deoxyribose-5-phosphate aldolase | D2F89_14630 | Not Available | Negative | 2867031 - 2867810 | 27735.3 |
| yjji family glycine radical enzyme | D2F89_14635 | Not Available | Positive | 2868068 - 2869618 | 58023.3 |
| yjjw family glycine radical enzyme activase | D2F89_14640 | Not Available | Positive | 2869590 - 2870453 | 31465.3 |
| dna polymerase ii | D2F89_14645 | Not Available | Positive | 2870710 - 2872677 | 75233.9 |
| rna polymerase-associated protein rapa | D2F89_14650 | Not Available | Positive | 2872841 - 2875747 | 109775.0 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | D2F89_14655 | Not Available | Positive | 2875759 - 2876418 | 24888.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





