Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | D2F89_14310 | Not Available | Negative | 2800843 - 2801691 | 32550.2 |
| protein syd | D2F89_14315 | Not Available | Positive | 2801759 - 2802304 | 20709.6 |
| yqcc family protein | D2F89_14320 | Not Available | Positive | 2802926 - 2803255 | 12742.2 |
| trna pseudouridine(65) synthase truc | D2F89_14325 | Not Available | Positive | 2803255 - 2804037 | 29667.5 |
| flavodoxin | D2F89_14330 | Not Available | Positive | 2804055 - 2804504 | 16275.1 |
| mfs transporter | D2F89_14335 | Not Available | Positive | 2804939 - 2806291 | 49145.0 |
| glucarate dehydratase-related protein | D2F89_14340 | Not Available | Positive | 2806293 - 2807633 | 48910.4 |
| glucarate dehydratase | D2F89_14345 | Not Available | Positive | 2807654 - 2808994 | 49143.9 |
| two-component sensor histidine kinase bara | D2F89_14350 | Not Available | Negative | 2809226 - 2811982 | 102401.0 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | D2F89_14355 | Not Available | Positive | 2812039 - 2813340 | 48097.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





