Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2779576 - 2779652 | Not Available |
| murein transglycosylase a | D2F89_14215 | Not Available | Positive | 2779861 - 2780958 | 40412.9 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | D2F89_14220 | Not Available | Positive | 2781197 - 2782003 | 28517.5 |
| sulfur acceptor protein csde | D2F89_14225 | Not Available | Negative | 2782054 - 2782497 | 15941.2 |
| cysteine desulfurase csda | D2F89_14230 | Not Available | Negative | 2782497 - 2783702 | 43264.6 |
| ygdi/ygdr family lipoprotein | D2F89_14235 | Not Available | Positive | 2783894 - 2784121 | 8174.67 |
| glycine cleavage system transcriptional activator | D2F89_14240 | Not Available | Positive | 2784472 - 2785389 | 34403.4 |
| duf423 domain-containing protein | D2F89_14245 | Not Available | Positive | 2785408 - 2785803 | 14334.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | D2F89_14250 | Not Available | Positive | 2785796 - 2786896 | 41907.5 |
| l-fucose operon activator | D2F89_14255 | Not Available | Negative | 2786940 - 2787671 | 27363.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





