Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phnl | D2F89_13595 | Not Available | Positive | 2651039 - 2651719 | 24676.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | D2F89_13600 | Not Available | Positive | 2651716 - 2652852 | 41986.8 |
| ribose 1,5-bisphosphokinase | D2F89_13605 | Not Available | Positive | 2652852 - 2653409 | 20769.8 |
| protein phno | D2F89_13610 | Not Available | Positive | 2653396 - 2653830 | 16570.8 |
| phosphonate metabolism protein phnp | D2F89_13615 | Not Available | Positive | 2653832 - 2654590 | 27900.3 |
| hypothetical protein | D2F89_13620 | Not Available | Negative | 2654667 - 2654996 | 13457.2 |
| hamp domain-containing protein | D2F89_13625 | Not Available | Negative | 2655065 - 2657326 | 82228.5 |
| histidine kinase | D2F89_13630 | Not Available | Negative | 2657328 - 2657441 | 3974.78 |
| sugar abc transporter atp-binding protein | D2F89_13635 | Not Available | Positive | 2657440 - 2658960 | 55192.4 |
| ribose abc transporter permease | D2F89_13640 | Not Available | Positive | 2658957 - 2659931 | 33949.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





