Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethylsulfoxide reductase | D2F89_13285 | Not Available | Positive | 2588625 - 2589242 | 22752.9 |
| dimethyl sulfoxide reductase anchor subunit | D2F89_13290 | Not Available | Positive | 2589244 - 2590098 | 30488.5 |
| tat proofreading chaperone dmsd | D2F89_13295 | Not Available | Positive | 2590141 - 2590755 | 23335.8 |
| voltage-gated clc-type chloride channel clcb | D2F89_13300 | Not Available | Positive | 2590914 - 2592206 | 45697.0 |
| dethiobiotin synthase | D2F89_13305 | Not Available | Negative | 2592159 - 2592854 | 24982.5 |
| rok family transcriptional regulator | D2F89_13310 | Not Available | Negative | 2592979 - 2594199 | 44292.7 |
| lysr family transcriptional regulator | D2F89_13315 | Not Available | Negative | 2594334 - 2595227 | 33297.4 |
| oxalate/formate antiport family mfs transporter | D2F89_13320 | Not Available | Negative | 2595359 - 2596561 | 42745.1 |
| hypothetical protein | D2F89_13325 | Not Available | Positive | 2596555 - 2596734 | 6620.15 |
| autotransporter domain-containing protein | D2F89_13330 | Not Available | Negative | 2596790 - 2597488 | 25934.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





