Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase | D2F89_12970 | Not Available | Positive | 2547057 - 2547181 | 5147.55 |
| starvation-sensing protein rspa | D2F89_13240 | Not Available | Negative | 2579563 - 2580777 | 45971.0 |
| hypothetical protein | D2F89_13245 | Not Available | Negative | 2580758 - 2580946 | 7276.72 |
| ynfa family protein | D2F89_13250 | Not Available | Negative | 2580983 - 2581309 | 11920.2 |
| duf1283 family protein | D2F89_13255 | Not Available | Positive | 2581444 - 2581785 | 12961.4 |
| spermidine n1-acetyltransferase | D2F89_13260 | Not Available | Positive | 2581820 - 2582380 | 21902.3 |
| ynfc family lipoprotein | D2F89_13265 | Not Available | Negative | 2582383 - 2583093 | 26474.3 |
| duf1161 domain-containing protein | D2F89_13270 | Not Available | Positive | 2583201 - 2583506 | 10491.3 |
| dimethyl sulfoxide reductase subunit a | D2F89_13275 | Not Available | Positive | 2583704 - 2586130 | 89602.7 |
| dimethyl sulfoxide reductase subunit a | D2F89_13280 | Not Available | Positive | 2586191 - 2588614 | 90041.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





