Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna starvation/stationary phase protection protein | D2F89_11910 | Not Available | Positive | 2331029 - 2331532 | 18696.3 |
| amino acid abc transporter substrate-binding protein | D2F89_11920 | Not Available | Positive | 2331936 - 2332682 | 27191.5 |
| glutamine abc transporter permease | D2F89_11925 | Not Available | Positive | 2332821 - 2333480 | 24365.8 |
| glutamine abc transporter atp-binding protein glnq | D2F89_11930 | Not Available | Positive | 2333477 - 2334199 | 26733.6 |
| moderate conductance mechanosensitive channel ybio | D2F89_11935 | Not Available | Positive | 2334460 - 2336685 | 81908.5 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | D2F89_11940 | Not Available | Negative | 2336682 - 2337713 | 38403.0 |
| duf1471 domain-containing protein | D2F89_11945 | Not Available | Positive | 2337740 - 2338144 | 14655.7 |
| catecholate siderophore receptor fiu | D2F89_11950 | Not Available | Positive | 2338409 - 2340691 | 81932.4 |
| fe2+-dependent dioxygenase | D2F89_11955 | Not Available | Positive | 2340733 - 2341410 | 25546.2 |
| dksa/trar family c4-type zinc finger protein | D2F89_11960 | Not Available | Positive | 2341484 - 2341750 | 9804.42 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





