Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D2F89_11750 | Not Available | Negative | 2295537 - 2295767 | 8722.81 |
| mfs transporter | D2F89_11755 | Not Available | Negative | 2295768 - 2296267 | 18177.9 |
| undecaprenyl-diphosphate phosphatase | D2F89_11760 | Not Available | Positive | 2296552 - 2297148 | 22389.8 |
| dna-binding transcriptional repressor deor | D2F89_11765 | Not Available | Positive | 2297206 - 2297964 | 28558.5 |
| d-alanyl-d-alanine carboxypeptidase | D2F89_11770 | Not Available | Negative | 2298011 - 2299213 | 43643.4 |
| glutathione s-transferase | D2F89_11775 | Not Available | Positive | 2299461 - 2300087 | 23744.5 |
| biofilm regulator bssr | D2F89_11785 | Not Available | Negative | 2301310 - 2301693 | 14536.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | D2F89_11790 | Not Available | Positive | 2301906 - 2303231 | 49584.6 |
| ggdef domain-containing protein | D2F89_11795 | Not Available | Negative | 2303278 - 2304606 | 49909.8 |
| eal domain-containing protein | D2F89_11800 | Not Available | Negative | 2304614 - 2306962 | 90086.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





