Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent dna ligase ligb | D2F89_10290 | Not Available | Negative | 2024217 - 2025899 | 63208.9 |
| guanylate kinase | D2F89_10295 | Not Available | Positive | 2026157 - 2026780 | 23594.1 |
| dna-directed rna polymerase subunit omega | D2F89_10300 | Not Available | Positive | 2026835 - 2027110 | 10237.2 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | D2F89_10305 | Not Available | Positive | 2027129 - 2029237 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | D2F89_10310 | Not Available | Positive | 2029244 - 2029933 | 25345.6 |
| atp-dependent dna helicase recg | D2F89_10315 | Not Available | Positive | 2029939 - 2032020 | 76528.2 |
| sodium/glutamate symport carrier protein | D2F89_10320 | Not Available | Negative | 2032196 - 2033401 | 42445.9 |
| xanthine permease xanp | D2F89_10325 | Not Available | Positive | 2033681 - 2035072 | 48871.2 |
| asma family protein | D2F89_10330 | Not Available | Positive | 2035193 - 2036902 | 62132.7 |
| d-lyxose/d-mannose family sugar isomerase | D2F89_10335 | Not Available | Negative | 2036946 - 2037626 | 26154.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





