Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PS00209 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4860 genes
Non-Coding Genes
327 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | D2F89_10015 | Not Available | Negative | 1980546 - 1981094 | 20598.1 |
| tvp38/tmem64 family protein | D2F89_10020 | Not Available | Negative | 1981094 - 1981801 | 26110.8 |
| protein ydjy | D2F89_10025 | Not Available | Negative | 1981816 - 1982493 | 24186.7 |
| tvp38/tmem64 family protein | D2F89_10030 | Not Available | Negative | 1982498 - 1983208 | 26093.8 |
| exodeoxyribonuclease iii | D2F89_10035 | Not Available | Negative | 1983375 - 1984181 | 30938.8 |
| aspartate aminotransferase family protein | D2F89_10045 | Not Available | Positive | 1984627 - 1985847 | 43557.7 |
| arginine n-succinyltransferase | D2F89_10050 | Not Available | Positive | 1985844 - 1986878 | 38458.0 |
| succinylglutamate-semialdehyde dehydrogenase | D2F89_10055 | Not Available | Positive | 1986875 - 1988353 | 52870.1 |
| n-succinylarginine dihydrolase | D2F89_10060 | Not Available | Positive | 1988350 - 1989693 | 49360.5 |
| succinylglutamate desuccinylase | D2F89_10065 | Not Available | Positive | 1989686 - 1990654 | 35802.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





