Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is classified as a non-motile organism and is considered mesophilic, with an optimal growth temperature of 25°C. It utilizes organic compounds as its energy source, functioning as both an organotroph and chemotroph. Nakamurella silvestris strain DSM 102309 has a single replicon, indicating a streamlined genomic organization. Notably, this strain does not form spores, which may influence its survival strategies in various environments. The ecological significance of Nakamurella silvestris lies in its potential role in organic matter decomposition and nutrient cycling, as it relies on organic compounds for energy. This capability may make it important in soil ecosystems and other environments where organic materials are abundant. Further research could illuminate its interactions within microbial communities and its contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
Strainstrain DSM 102309

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309 scaffold4517, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding response regulatorD1871_21005Not AvailableNegative4805807 - 480648424845.0
bifunctional lysylphosphatidylglycerol synthetase/lysine--trna ligase lysxD1871_21010Not AvailableNegative4806593 - 4809850117040.0
nadp-dependent oxidoreductaseD1871_21015Not AvailableNegative4809955 - 481099536168.4
fmn reductase (nadph)D1871_21020Not AvailablePositive4811443 - 481256739919.9
hypothetical proteinD1871_21025Not AvailablePositive4812648 - 481457968651.6
llm class flavin-dependent oxidoreductaseD1871_21030Not AvailablePositive4814569 - 481568439834.4
duf1684 domain-containing proteinD1871_21035Not AvailablePositive4815775 - 481663230499.6
fad-dependent oxidoreductaseD1871_21040Not AvailableNegative4816785 - 481785538447.3
abc transporter substrate-binding proteinD1871_21045Not AvailableNegative4818070 - 481919438712.5
amino acid abc transporter atp-binding proteinD1871_21050Not AvailableNegative4819311 - 482008127844.9

Displaying genes 4081 – 4090 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.