Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is classified as a non-motile organism and is considered mesophilic, with an optimal growth temperature of 25°C. It utilizes organic compounds as its energy source, functioning as both an organotroph and chemotroph. Nakamurella silvestris strain DSM 102309 has a single replicon, indicating a streamlined genomic organization. Notably, this strain does not form spores, which may influence its survival strategies in various environments. The ecological significance of Nakamurella silvestris lies in its potential role in organic matter decomposition and nutrient cycling, as it relies on organic compounds for energy. This capability may make it important in soil ecosystems and other environments where organic materials are abundant. Further research could illuminate its interactions within microbial communities and its contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
Strainstrain DSM 102309

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309 scaffold4517, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c biogenesis protein resbD1871_20635Not AvailableNegative4722704 - 472434159932.2
cytochrome c biogenesis protein ccdaD1871_20640Not AvailableNegative4724338 - 472514728576.8
tlpa family protein disulfide reductaseD1871_20645Not AvailableNegative4725162 - 472584823680.9
histidine phosphatase family proteinD1871_20650Not AvailableNegative4725845 - 472649523388.0
hypothetical proteinD1871_20655Not AvailableNegative4726506 - 472690413621.4
hypothetical proteinD1871_20660Not AvailableNegative4726917 - 472763024663.0
bifunctional uroporphyrinogen-iii c-methyltransferase/uroporphyrinogen-iii synthaseD1871_20665Not AvailableNegative4727685 - 472920852834.1
redox-sensing transcriptional repressor rexD1871_20670Not AvailableNegative4729303 - 473013328466.7
glutaredoxin family proteinD1871_20675Not AvailableNegative4730299 - 47305448774.4
long-chain fatty acid--coa ligaseD1871_20680Not AvailableNegative4730570 - 473243564635.2

Displaying genes 4011 – 4020 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.