Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is classified as a non-motile organism and is considered mesophilic, with an optimal growth temperature of 25°C. It utilizes organic compounds as its energy source, functioning as both an organotroph and chemotroph. Nakamurella silvestris strain DSM 102309 has a single replicon, indicating a streamlined genomic organization. Notably, this strain does not form spores, which may influence its survival strategies in various environments. The ecological significance of Nakamurella silvestris lies in its potential role in organic matter decomposition and nutrient cycling, as it relies on organic compounds for energy. This capability may make it important in soil ecosystems and other environments where organic materials are abundant. Further research could illuminate its interactions within microbial communities and its contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
Strainstrain DSM 102309

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309 scaffold4517, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine synthaseD1871_16910Not AvailablePositive3891671 - 389270236609.7
nad-dependent dna ligase ligaD1871_16915Not AvailablePositive3892806 - 389494776909.2
cobyric acid synthaseD1871_16920Not AvailablePositive3894944 - 389642852461.2
n-acetyltransferaseD1871_16925Not AvailableNegative3896505 - 389713722544.8
methionyl-trna formyltransferaseD1871_16930Not AvailablePositive3897344 - 389827632078.5
rrna small subunit methyltransferase bD1871_16935Not AvailablePositive3898273 - 389969149997.4
ribulose-phosphate 3-epimeraseD1871_16940Not AvailablePositive3899768 - 390043023101.6
riboflavin synthaseD1871_16945Not AvailablePositive3900578 - 390125823276.4
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiD1871_16950Not AvailablePositive3901255 - 390250844633.5
6,7-dimethyl-8-ribityllumazine synthaseD1871_16955Not AvailablePositive3902505 - 390301417533.0

Displaying genes 3291 – 3300 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.