Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is classified as a non-motile organism and is considered mesophilic, with an optimal growth temperature of 25°C. It utilizes organic compounds as its energy source, functioning as both an organotroph and chemotroph. Nakamurella silvestris strain DSM 102309 has a single replicon, indicating a streamlined genomic organization. Notably, this strain does not form spores, which may influence its survival strategies in various environments. The ecological significance of Nakamurella silvestris lies in its potential role in organic matter decomposition and nutrient cycling, as it relies on organic compounds for energy. This capability may make it important in soil ecosystems and other environments where organic materials are abundant. Further research could illuminate its interactions within microbial communities and its contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
Strainstrain DSM 102309

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309 scaffold4517, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinD1871_16100Not AvailableNegative3715829 - 371679434585.4
rna polymerase sigma factorD1871_16105Not AvailableNegative3716791 - 371741122854.1
malate dehydrogenaseD1871_16110Not AvailableNegative3717685 - 371867134052.2
6-phosphogluconolactonaseD1871_16115Not AvailableNegative3718808 - 371956026180.2
glucose-6-phosphate dehydrogenase assembly protein opcaD1871_16120Not AvailableNegative3719562 - 372098348218.4
glucose-6-phosphate dehydrogenaseD1871_16125Not AvailableNegative3721030 - 372256257017.7
glucose-6-phosphate isomeraseD1871_16130Not AvailableNegative3722627 - 372427655930.0
transaldolaseD1871_16135Not AvailableNegative3724276 - 372540340161.1
transketolaseD1871_16140Not AvailableNegative3725525 - 372761874004.0
protoheme ix farnesyltransferaseD1871_16145Not AvailablePositive3727990 - 372894033713.1

Displaying genes 3131 – 3140 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.