Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is classified as a non-motile organism and is considered mesophilic, with an optimal growth temperature of 25°C. It utilizes organic compounds as its energy source, functioning as both an organotroph and chemotroph. Nakamurella silvestris strain DSM 102309 has a single replicon, indicating a streamlined genomic organization. Notably, this strain does not form spores, which may influence its survival strategies in various environments. The ecological significance of Nakamurella silvestris lies in its potential role in organic matter decomposition and nutrient cycling, as it relies on organic compounds for energy. This capability may make it important in soil ecosystems and other environments where organic materials are abundant. Further research could illuminate its interactions within microbial communities and its contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
Strainstrain DSM 102309

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309 scaffold4517, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssga family sporulation/cell division regulatorD1871_12575Not AvailableNegative2896726 - 289718716999.9
Trna-valNot AvailableNot AvailablePositive2897540 - 2897611Not Available
threonine--trna ligaseD1871_12585Not AvailablePositive2897731 - 289992681311.2
hit domain-containing proteinD1871_12590Not AvailablePositive2899951 - 290052020504.6
cdp-alcohol phosphatidyltransferase family proteinD1871_12595Not AvailablePositive2900600 - 290123521754.8
phosphatidylinositol mannoside acyltransferaseD1871_12600Not AvailablePositive2901228 - 290215433662.4
glycosyltransferase family 1 proteinD1871_12605Not AvailablePositive2902151 - 290328139566.7
nudix domain-containing proteinD1871_12610Not AvailablePositive2903374 - 290438737781.9
duf3048 domain-containing proteinD1871_12615Not AvailablePositive2904191 - 290571453469.9
pyridoxal 5'-phosphate synthase lyase subunit pdxsD1871_12620Not AvailablePositive2905887 - 290681032291.8

Displaying genes 2451 – 2460 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.