Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is classified as a non-motile organism and is considered mesophilic, with an optimal growth temperature of 25°C. It utilizes organic compounds as its energy source, functioning as both an organotroph and chemotroph. Nakamurella silvestris strain DSM 102309 has a single replicon, indicating a streamlined genomic organization. Notably, this strain does not form spores, which may influence its survival strategies in various environments. The ecological significance of Nakamurella silvestris lies in its potential role in organic matter decomposition and nutrient cycling, as it relies on organic compounds for energy. This capability may make it important in soil ecosystems and other environments where organic materials are abundant. Further research could illuminate its interactions within microbial communities and its contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
Strainstrain DSM 102309

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309 scaffold4517, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseD1871_12175Not AvailablePositive2807488 - 280899951461.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseD1871_12180Not AvailablePositive2808996 - 281044449110.5
phospho-n-acetylmuramoyl-pentapeptide- transferaseD1871_12185Not AvailablePositive2810441 - 281153238826.2
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseD1871_12190Not AvailablePositive2811534 - 281301250431.8
putative lipid ii flippase ftswD1871_12195Not AvailablePositive2813009 - 281496470105.0
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseD1871_12200Not AvailablePositive2815006 - 281608837214.1
udp-n-acetylmuramate--l-alanine ligaseD1871_12205Not AvailablePositive2816085 - 281759351290.1
peptidase s33D1871_12210Not AvailablePositive2817590 - 281833025674.2
cell division protein ftszD1871_12215Not AvailablePositive2818637 - 281979439681.3
peptidoglycan editing factor pgefD1871_12220Not AvailablePositive2819918 - 282066124985.9

Displaying genes 2371 – 2380 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.