Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is classified as a non-motile organism and is considered mesophilic, with an optimal growth temperature of 25°C. It utilizes organic compounds as its energy source, functioning as both an organotroph and chemotroph. Nakamurella silvestris strain DSM 102309 has a single replicon, indicating a streamlined genomic organization. Notably, this strain does not form spores, which may influence its survival strategies in various environments. The ecological significance of Nakamurella silvestris lies in its potential role in organic matter decomposition and nutrient cycling, as it relies on organic compounds for energy. This capability may make it important in soil ecosystems and other environments where organic materials are abundant. Further research could illuminate its interactions within microbial communities and its contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
Strainstrain DSM 102309

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309 scaffold4517, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylaseD1871_11665Not AvailableNegative2672635 - 267395146886.2
low temperature requirement protein aD1871_11670Not AvailableNegative2674364 - 267562645652.4
duf3817 domain-containing proteinD1871_11675Not AvailablePositive2675715 - 267605312503.5
metal-dependent hydrolaseD1871_11680Not AvailableNegative2676148 - 267703831097.7
hypothetical proteinD1871_11685Not AvailableNegative2677020 - 26772297641.47
ribonucleotide-diphosphate reductase subunit betaD1871_11690Not AvailableNegative2677688 - 267881842529.4
ribonucleoside-diphosphate reductase subunit alphaD1871_11695Not AvailableNegative2678818 - 2681835109461.0
sugar o-acetyltransferaseD1871_11700Not AvailablePositive2682422 - 268306623413.6
hypothetical proteinD1871_11705Not AvailablePositive2683401 - 268387716858.4
collagen-like triple helix repeat-containing proteinD1871_11710Not AvailablePositive2684716 - 268700181635.6

Displaying genes 2271 – 2280 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.