Nakamurella silvestris strain DSM 102309

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Nakamurellales

Family

Nakamurellaceae

Genus

Nakamurella

Description

Nakamurella silvestris strain DSM 102309 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is classified as a non-motile organism and is considered mesophilic, with an optimal growth temperature of 25°C. It utilizes organic compounds as its energy source, functioning as both an organotroph and chemotroph. Nakamurella silvestris strain DSM 102309 has a single replicon, indicating a streamlined genomic organization. Notably, this strain does not form spores, which may influence its survival strategies in various environments. The ecological significance of Nakamurella silvestris lies in its potential role in organic matter decomposition and nutrient cycling, as it relies on organic compounds for energy. This capability may make it important in soil ecosystems and other environments where organic materials are abundant. Further research could illuminate its interactions within microbial communities and its contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderNakamurellales
FamilyNakamurellaceae
GenusNakamurella
SpeciesNakamurella silvestris
Strainstrain DSM 102309

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Nakamurella silvestris strain DSM 102309 scaffold4517, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system pemk/mazf family toxinD1871_04800Not AvailableNegative1164757 - 116511312931.1
phenylalanine--trna ligase subunit alphaD1871_04805Not AvailablePositive1165570 - 116666739982.0
phenylalanine--trna ligase subunit betaD1871_04810Not AvailablePositive1166671 - 116916687332.2
phosphodiesteraseD1871_04815Not AvailablePositive1169269 - 116986521052.6
alkaline phosphatase family proteinD1871_04820Not AvailablePositive1169896 - 117106241470.6
n-acetyl-gamma-glutamyl-phosphate reductaseD1871_04825Not AvailablePositive1171233 - 117226134396.4
bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argjD1871_04830Not AvailablePositive1172258 - 117340938306.3
acetylglutamate kinaseD1871_04835Not AvailablePositive1173406 - 117435933134.2
acetylornithine transaminaseD1871_04840Not AvailablePositive1174404 - 117559440322.3
ornithine carbamoyltransferaseD1871_04845Not AvailablePositive1175594 - 117651433346.7

Displaying genes 1011 – 1020 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.