Chryseobacterium nematophagum strain JUb275

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nematophagum strain JUb275 is a rod-shaped bacterium characterized by its single replicon structure. It is cataloged under the accession number QWIV00000000.1, which provides a unique identifier for genomic data related to this strain. As a member of the Chryseobacterium genus, strain JUb275 is likely to exhibit traits commonly associated with other members of this group, including its potential ecological roles and interactions with nematodes. Chryseobacterium species are known for their diverse metabolic capabilities and adaptability to various environments. The rod shape of Chryseobacterium nematophagum strain JUb275 suggests a morphology that may facilitate its movement and survival in different habitats, although specific ecological niches or interactions for this strain have not been detailed. The presence of a single replicon indicates a streamlined genomic organization, which might be advantageous for efficient replication and adaptation to environmental pressures. In summary, the characteristics of Chryseobacterium nematophagum strain JUb275, including its rod shape and genomic structure, contribute to its potential ecological functionality. While specific interactions with nematodes remain to be explored, the traits observed in this strain suggest it may play a role in microbial communities and contribute to nutrient cycling or biocontrol in its native environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nematophagum
Strainstrain JUb275

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nematophagum strain JUb275 contig000015, whole

Gene Summary

Adenine Count

1457712 bp

Thymine Count

1467943 bp

Guanine Count

707939 bp

Cytosine Count

711939 bp

Genome Length

4345533 bp

Protein-coding Genes

3487 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-binding proteinD1632_13330Not AvailableNegative3165608 - 316706554628.7
taud/tfda family dioxygenaseD1632_13335Not AvailableNegative3167062 - 316789832708.7
pyoverdine biosynthesis protein pvcaD1632_13340Not AvailableNegative3167932 - 316884034613.6
30s ribosomal protein s1D1632_13345Not AvailableNegative3169275 - 317106266567.8
atp-dependent helicaseD1632_13350Not AvailablePositive3171336 - 317264349714.6
smp-30/gluconolactonase/lre family proteinD1632_13355Not AvailableNegative3172699 - 317359234261.6
merr family transcriptional regulatorD1632_13360Not AvailablePositive3173856 - 317420013323.2
hypothetical proteinD1632_13365Not AvailablePositive3174342 - 317537640318.8
23s rrna pseudouridine(2604) synthase rlufD1632_13370Not AvailableNegative3175522 - 317624727956.2
trna pseudouridine(55) synthase trubD1632_13375Not AvailableNegative3176225 - 317695627639.3

Displaying genes 2631 – 2640 of 3575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.