Chryseobacterium nematophagum strain JUb275

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nematophagum strain JUb275 is a rod-shaped bacterium characterized by its single replicon structure. It is cataloged under the accession number QWIV00000000.1, which provides a unique identifier for genomic data related to this strain. As a member of the Chryseobacterium genus, strain JUb275 is likely to exhibit traits commonly associated with other members of this group, including its potential ecological roles and interactions with nematodes. Chryseobacterium species are known for their diverse metabolic capabilities and adaptability to various environments. The rod shape of Chryseobacterium nematophagum strain JUb275 suggests a morphology that may facilitate its movement and survival in different habitats, although specific ecological niches or interactions for this strain have not been detailed. The presence of a single replicon indicates a streamlined genomic organization, which might be advantageous for efficient replication and adaptation to environmental pressures. In summary, the characteristics of Chryseobacterium nematophagum strain JUb275, including its rod shape and genomic structure, contribute to its potential ecological functionality. While specific interactions with nematodes remain to be explored, the traits observed in this strain suggest it may play a role in microbial communities and contribute to nutrient cycling or biocontrol in its native environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nematophagum
Strainstrain JUb275

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nematophagum strain JUb275 contig000015, whole

Gene Summary

Adenine Count

1457712 bp

Thymine Count

1467943 bp

Guanine Count

707939 bp

Cytosine Count

711939 bp

Genome Length

4345533 bp

Protein-coding Genes

3487 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseD1632_10950Not AvailablePositive2464849 - 246557126559.8
imidazole glycerol phosphate synthase subunit hisfD1632_10955Not AvailablePositive2465564 - 246631627373.2
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieD1632_10960Not AvailablePositive2466313 - 246690022335.8
t9ss c-terminal target domain-containing proteinD1632_10965Not AvailableNegative2466975 - 246815643747.3
50s ribosomal protein l20D1632_10970Not AvailableNegative2468260 - 246860413229.2
50s ribosomal protein l35D1632_10975Not AvailableNegative2468721 - 24689187361.18
alpha/beta hydrolaseD1632_10980Not AvailableNegative2469138 - 246995930733.2
translation initiation factor if-3D1632_10985Not AvailableNegative2470157 - 247071721856.9
threonine--trna ligaseD1632_10990Not AvailableNegative2470809 - 247272872816.5
hypothetical proteinD1632_10995Not AvailableNegative2472900 - 247445962193.5

Displaying genes 2161 – 2170 of 3575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.