Chryseobacterium nematophagum strain JUb275

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nematophagum strain JUb275 is a rod-shaped bacterium characterized by its single replicon structure. It is cataloged under the accession number QWIV00000000.1, which provides a unique identifier for genomic data related to this strain. As a member of the Chryseobacterium genus, strain JUb275 is likely to exhibit traits commonly associated with other members of this group, including its potential ecological roles and interactions with nematodes. Chryseobacterium species are known for their diverse metabolic capabilities and adaptability to various environments. The rod shape of Chryseobacterium nematophagum strain JUb275 suggests a morphology that may facilitate its movement and survival in different habitats, although specific ecological niches or interactions for this strain have not been detailed. The presence of a single replicon indicates a streamlined genomic organization, which might be advantageous for efficient replication and adaptation to environmental pressures. In summary, the characteristics of Chryseobacterium nematophagum strain JUb275, including its rod shape and genomic structure, contribute to its potential ecological functionality. While specific interactions with nematodes remain to be explored, the traits observed in this strain suggest it may play a role in microbial communities and contribute to nutrient cycling or biocontrol in its native environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nematophagum
Strainstrain JUb275

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nematophagum strain JUb275 contig000015, whole

Gene Summary

Adenine Count

1457712 bp

Thymine Count

1467943 bp

Guanine Count

707939 bp

Cytosine Count

711939 bp

Genome Length

4345533 bp

Protein-coding Genes

3487 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gluconate 5-dehydrogenaseD1632_05890Not AvailablePositive1362638 - 136342027973.8
glucuronate isomeraseD1632_05895Not AvailablePositive1363440 - 136483753792.9
sugar kinaseD1632_05900Not AvailablePositive1364847 - 136585436721.8
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseD1632_05905Not AvailablePositive1365857 - 136652524483.7
mfs transporterD1632_05910Not AvailablePositive1366804 - 136833356953.5
tagaturonate reductaseD1632_05915Not AvailablePositive1368337 - 136980056687.7
altronate dehydrataseD1632_05920Not AvailablePositive1369807 - 137142358775.7
laci family transcriptional regulatorD1632_05925Not AvailableNegative1371509 - 137253738072.9
d-xylose transporter xyleD1632_05930Not AvailableNegative1372783 - 137420452000.7
xylose isomeraseD1632_05935Not AvailableNegative1374252 - 137558050329.1

Displaying genes 1161 – 1170 of 3575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.