Chryseobacterium nematophagum strain JUb129

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nematophagum strain JUb129 is characterized by its rod-shaped morphology and possesses a single replicon. The strain is cataloged under the accession number QWIU00000000.1, which provides a reference for genetic and genomic information. The rod shape of Chryseobacterium nematophagum is typical of many bacteria within the genus Chryseobacterium, which are known for their adaptability to various environments. This adaptability may contribute to the ecological roles that these bacteria play, particularly in soil and aquatic ecosystems. The presence of a single replicon suggests a streamlined genomic organization, which may enhance the efficiency of cellular processes. Such traits could imply that strain JUb129 is well-adapted for survival in its specific ecological niche, possibly involving interactions with other microorganisms or nematodes, given the species designation "nematophagum," which indicates a potential relationship with nematodes. In summary, Chryseobacterium nematophagum strain JUb129, with its rod shape and single replicon, exemplifies characteristics that may facilitate its ecological functions and interactions within its environment. Further studies could elucidate its specific roles and contributions to microbial communities, particularly in relation to nematodes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nematophagum
Strainstrain JUb129

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nematophagum strain JUb129 contig000003, whole

Gene Summary

Adenine Count

1514967 bp

Thymine Count

1508127 bp

Guanine Count

725534 bp

Cytosine Count

744136 bp

Genome Length

4492764 bp

Protein-coding Genes

3589 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chorismate synthaseD1631_16300Not AvailablePositive3908662 - 390973239050.6
thioredoxin family proteinD1631_16305Not AvailablePositive3909747 - 391031021927.0
tlpa family protein disulfide reductaseD1631_16310Not AvailablePositive3910347 - 391088620759.2
duf1232 domain-containing proteinD1631_16315Not AvailablePositive3910967 - 391131412980.6
orotate phosphoribosyltransferaseD1631_16320Not AvailablePositive3911483 - 391286251199.7
aminopeptidaseD1631_16325Not AvailablePositive3912895 - 3915738110307.0
hypothetical proteinD1631_16330Not AvailablePositive3915951 - 3919148123082.0
trna dihydrouridine synthase dusbD1631_16335Not AvailablePositive3919292 - 392028737896.7
deoxyribose-phosphate aldolaseD1631_16340Not AvailableNegative3920414 - 392115727116.3
winged helix-turn-helix transcriptional regulatorD1631_16345Not AvailableNegative3921162 - 392163217769.7

Displaying genes 3211 – 3220 of 3679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.