Chryseobacterium nematophagum strain JUb129

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nematophagum strain JUb129 is characterized by its rod-shaped morphology and possesses a single replicon. The strain is cataloged under the accession number QWIU00000000.1, which provides a reference for genetic and genomic information. The rod shape of Chryseobacterium nematophagum is typical of many bacteria within the genus Chryseobacterium, which are known for their adaptability to various environments. This adaptability may contribute to the ecological roles that these bacteria play, particularly in soil and aquatic ecosystems. The presence of a single replicon suggests a streamlined genomic organization, which may enhance the efficiency of cellular processes. Such traits could imply that strain JUb129 is well-adapted for survival in its specific ecological niche, possibly involving interactions with other microorganisms or nematodes, given the species designation "nematophagum," which indicates a potential relationship with nematodes. In summary, Chryseobacterium nematophagum strain JUb129, with its rod shape and single replicon, exemplifies characteristics that may facilitate its ecological functions and interactions within its environment. Further studies could elucidate its specific roles and contributions to microbial communities, particularly in relation to nematodes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nematophagum
Strainstrain JUb129

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nematophagum strain JUb129 contig000003, whole

Gene Summary

Adenine Count

1514967 bp

Thymine Count

1508127 bp

Guanine Count

725534 bp

Cytosine Count

744136 bp

Genome Length

4492764 bp

Protein-coding Genes

3589 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1003 domain-containing proteinD1631_13060Not AvailableNegative3156655 - 315718520508.2
tigr02757 family proteinD1631_13065Not AvailableNegative3157200 - 315796730319.3
ribonuclease zD1631_13070Not AvailableNegative3157975 - 315888934766.8
rdgb/ham1 family non-canonical purine ntp pyrophosphataseD1631_13075Not AvailableNegative3158933 - 315952022189.4
cpbp family intramembrane metalloproteaseD1631_13080Not AvailableNegative3159580 - 316041031923.0
peptide chain release factor 3D1631_13085Not AvailablePositive3160677 - 316226960199.2
t9ss c-terminal target domain-containing proteinD1631_13090Not AvailableNegative3162417 - 316493091229.1
hypothetical proteinD1631_13095Not AvailableNegative3165665 - 316602714000.0
acyl-coa dehydrogenaseD1631_13100Not AvailableNegative3166056 - 316719541286.4
long-chain fatty acid--coa ligaseD1631_13105Not AvailablePositive3167346 - 316912766870.8

Displaying genes 2571 – 2580 of 3679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.