Chryseobacterium nematophagum strain JUb129

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium nematophagum strain JUb129 is characterized by its rod-shaped morphology and possesses a single replicon. The strain is cataloged under the accession number QWIU00000000.1, which provides a reference for genetic and genomic information. The rod shape of Chryseobacterium nematophagum is typical of many bacteria within the genus Chryseobacterium, which are known for their adaptability to various environments. This adaptability may contribute to the ecological roles that these bacteria play, particularly in soil and aquatic ecosystems. The presence of a single replicon suggests a streamlined genomic organization, which may enhance the efficiency of cellular processes. Such traits could imply that strain JUb129 is well-adapted for survival in its specific ecological niche, possibly involving interactions with other microorganisms or nematodes, given the species designation "nematophagum," which indicates a potential relationship with nematodes. In summary, Chryseobacterium nematophagum strain JUb129, with its rod shape and single replicon, exemplifies characteristics that may facilitate its ecological functions and interactions within its environment. Further studies could elucidate its specific roles and contributions to microbial communities, particularly in relation to nematodes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium nematophagum
Strainstrain JUb129

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium nematophagum strain JUb129 contig000003, whole

Gene Summary

Adenine Count

1514967 bp

Thymine Count

1508127 bp

Guanine Count

725534 bp

Cytosine Count

744136 bp

Genome Length

4492764 bp

Protein-coding Genes

3589 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tetratricopeptide repeat proteinD1631_09565Not AvailablePositive2223772 - 222459030675.6
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhD1631_09570Not AvailableNegative2224596 - 222506918562.6
yihy/virulence factor brkb family proteinD1631_09575Not AvailablePositive2225101 - 222609638435.6
na+/h+ antiporter nhaaD1631_09580Not AvailableNegative2226103 - 222727843195.9
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseD1631_09585Not AvailableNegative2227281 - 222949185115.0
hypothetical proteinD1631_09590Not AvailableNegative2229601 - 222996613674.9
acetate--coa ligaseD1631_09595Not AvailableNegative2230216 - 223212672118.2
propionyl-coa synthetaseD1631_09600Not AvailableNegative2232189 - 223407570923.1
response regulatorD1631_09605Not AvailableNegative2234153 - 223451513865.2
ghkl domain-containing proteinD1631_09610Not AvailableNegative2234525 - 2237227102837.0

Displaying genes 1881 – 1890 of 3679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.