Clavibacter phaseoli strain CFBP 8217 CFBP82171002

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter phaseoli strain CFBP 8217 (CFBP82171002) is a rod-shaped bacterium, which is a characteristic morphological feature of the species. This strain possesses flagella, indicating that it is motile, which can play a significant role in its ecological interactions and ability to colonize various environments. The strain is characterized by having a single replicon, suggesting a streamlined genetic organization that is typical for certain bacterial species. This trait may contribute to its efficiency in replication and adaptation to its ecological niche. The genomic data associated with Clavibacter phaseoli strain CFBP 8217 is cataloged under the accession number QWGS00000000.1, which provides a reference for researchers interested in studying its genetic makeup and potential functions. From a biological or ecological perspective, the motility conferred by flagella in Clavibacter phaseoli may facilitate its movement toward nutrient-rich environments or allow it to evade unfavorable conditions. This adaptability is crucial for survival and proliferation, particularly in agricultural settings where the strain may interact with host plants or compete with other microorganisms. Overall, the combination of its rod shape, motility, and genomic characteristics underscores its potential significance in microbial ecology and plant health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter phaseoli
Strainstrain CFBP 8217 CFBP82171002

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter phaseoli strain CFBP 8217 CFBP82171002, whole genome

Gene Summary

Adenine Count

401870 bp

Thymine Count

404894 bp

Guanine Count

1116320 bp

Cytosine Count

1121585 bp

Genome Length

3044670 bp

Protein-coding Genes

3356 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDZF99_00285Not AvailablePositive65932 - 6734149384.2
phospho-n-acetylmuramoyl-pentapeptide- transferaseDZF99_00290Not AvailablePositive67335 - 6844439662.1
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDZF99_00295Not AvailablePositive68447 - 6999154699.7
putative lipid ii flippase ftswDZF99_00300Not AvailablePositive69948 - 7123745551.3
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseDZF99_00305Not AvailablePositive71234 - 714949347.5
sortaseDZF99_00310Not AvailablePositive71495 - 7275542607.0
murein biosynthesis integral membrane protein murjDZF99_00315Not AvailablePositive72792 - 7442056481.4
thioredoxin-disulfide reductaseDZF99_00320Not AvailablePositive74578 - 7561536304.8
thioredoxinDZF99_00325Not AvailablePositive75692 - 7601511747.2
plp-dependent aminotransferase family proteinDZF99_00330Not AvailablePositive76189 - 7751148123.5

Displaying genes 61 – 70 of 3406 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.